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    zfyve1 zinc finger, FYVE domain containing 1 [ Stegastes partitus (bicolor damselfish) ]

    Gene ID: 103357286, updated on 11-Mar-2024

    Summary

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    Gene symbol
    zfyve1
    Gene description
    zinc finger, FYVE domain containing 1
    See related
    Ensembl:ENSSPAG00000007896
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Stegastes partitus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
    Orthologs
    human zebrafish all
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    Genomic context

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    See zfyve1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577975.1 (544814..553860)

    NW_007577975.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member V Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class H Neighboring gene WD repeat domain 21 Neighboring gene double PHD fingers 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_007577975 unplaced scaffold reference Stegastes_partitus-1.0.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger FYVE domain-containing protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Stegastes_partitus-1.0.2

    Genomic

    1. NW_007577975.1 Reference Stegastes_partitus-1.0.2

      Range
      544814..553860
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008281778.1 → XP_008280000.1  zinc finger FYVE domain-containing protein 1-like isoform X1

      UniProtKB/TrEMBL
      A0A3B5A9U6, A0A9Y4JP90
      Related
      ENSSPAP00000010397.1, ENSSPAT00000010577.1
      Conserved Domains (3) summary
      cd01851
      Location:173 → 409
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:710 → 770
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:593 → 654
      PHD_SF; PHD finger superfamily

    2. XM_008281779.1 → XP_008280001.1  zinc finger FYVE domain-containing protein 1-like isoform X2

      UniProtKB/TrEMBL
      A0A3B5A9U6, A0A9Y4MT11
      Conserved Domains (3) summary
      cd01851
      Location:37 → 273
      GBP; Guanylate-binding protein (GBP) family (N-terminal domain)
      cd15734
      Location:574 → 634
      FYVE_ZFYV1; FYVE domains found in zinc finger FYVE domain-containing protein 1 (ZFYV1) and similar proteins
      cl22851
      Location:457 → 518
      PHD_SF; PHD finger superfamily
    Nucleotide Protein
    Heading Accession and Version

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