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    LOC103755523 hemoglobin subunit epsilon [ Manacus vitellinus (golden-collared manakin) ]

    Gene ID: 103755523, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC103755523
    Gene description
    hemoglobin subunit epsilon
    See related
    Ensembl:ENSMVIG00005009994
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Manacus vitellinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
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    Genomic context

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    See LOC103755523 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021938894.1 (263554..273365)
    101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219433.1 (292725..303854)

    NW_021938894.1Genomic Context describing neighboring genes Neighboring gene hemoglobin subunit rho Neighboring gene hemoglobin subunit beta Neighboring gene olfactory receptor 52R1-like Neighboring gene olfactory receptor 51G2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables haptoglobin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables organic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen carrier activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxygen transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in blood microparticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of haptoglobin-hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hemoglobin subunit epsilon; uncharacterized protein LOC103755523

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM171598v3

    Genomic

    1. NW_021938894.1 Reference ASM171598v3

      Range
      263554..273365
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025896811.2 → XP_025752596.2  hemoglobin subunit epsilon isoform X3

      Conserved Domains (1) summary
      cd08925
      Location:128 → 266
      Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits

    2. XM_018089175.3 → XP_017944664.3  uncharacterized protein LOC103755523 isoform X1

      Conserved Domains (1) summary
      cd08925
      Location:128 → 225
      Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits

    3. XM_018089176.3 → XP_017944665.3  uncharacterized protein LOC103755523 isoform X2

      Conserved Domains (1) summary
      cd08925
      Location:128 → 225
      Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits
    Nucleotide Protein
    Heading Accession and Version

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