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    RBM5 RNA binding motif protein 5 [ Merops nubicus (carmine bee-eater) ]

    Gene ID: 103772134, updated on 3-Aug-2024

    Summary

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    Gene symbol
    RBM5
    Gene description
    RNA binding motif protein 5
    Locus tag
    N331_10226
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Merops nubicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Coraciiformes; Meropidae; Merops
    Orthologs
    human mouse all
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    Genomic context

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    See RBM5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current ASM69184v1 (GCF_000691845.1) Unplaced Scaffold NW_008583051.1 (323..13627)

    NW_008583051.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008583051.1 Unplaced Scaffold Reference ASM69184v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Merops nubicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69184v1

    Genomic

    1. NW_008583051.1 Reference ASM69184v1

      Range
      323..13627
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008939455.1 → XP_008937703.1  RNA-binding protein 5

      UniProtKB/TrEMBL
      A0A091Q9V7
      Conserved Domains (7) summary
      COG0724
      Location:1 → 81
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12755
      Location:129 → 214
      RRM2_RBM5; RNA recognition motif 2 in vertebrate RNA-binding protein 5 (RBM5)
      sd00025
      Location:85 → 104
      zf-RanBP2; RanBP2-type Zn finger [structural motif]
      pfam00641
      Location:81 → 110
      zf-RanBP; Zn-finger in Ran binding protein and others
      pfam01585
      Location:642 → 685
      G-patch; G-patch domain
      cd16168
      Location:353 → 408
      OCRE_RBM5; OCRE domain found in RNA-binding protein 5 (RBM5) and similar proteins
      cl17169
      Location:1 → 79
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein
    Heading Accession and Version

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