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    STIM2 stromal interaction molecule 2 [ Rhinopithecus roxellana (golden snub-nosed monkey) ]

    Gene ID: 104666778, updated on 12-Mar-2024

    Summary

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    Gene symbol
    STIM2
    Gene description
    stromal interaction molecule 2
    See related
    Ensembl:ENSRROG00000039681
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhinopithecus roxellana
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Rhinopithecus
    Orthologs
    human mouse all
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    Genomic context

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    See STIM2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current ASM756505v1 (GCF_007565055.1) 2 NC_044550.1 (45989862..46159922)
    100 previous assembly Rrox_v1 (GCF_000769185.1) Unplaced Scaffold NW_010809087.1 (305185..472124)

    Chromosome 2 - NC_044550.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene TBC1 domain family member 19 Neighboring gene small nucleolar RNA SNORD74 Neighboring gene protein PIMREG-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1K Neighboring gene ATP binding cassette subfamily G member 2 (JR blood group)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium channel regulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of store-operated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in store-operated calcium entry IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    stromal interaction molecule 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhinopithecus roxellana Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM756505v1 Primary Assembly

    Genomic

    1. NC_044550.1 Reference ASM756505v1 Primary Assembly

      Range
      45989862..46159922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030917586.1 → XP_030773446.1  stromal interaction molecule 2 isoform X2

      UniProtKB/TrEMBL
      A0A2K6QTF1
      Conserved Domains (3) summary
      cd09574
      Location:218 → 291
      SAM_STIM2; SAM domain of STIM2 subfamily proteins
      COG1196
      Location:324 → 525
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16533
      Location:434 → 531
      SOAR; STIM1 Orai1-activating region

    2. XM_010368900.2 → XP_010367202.2  stromal interaction molecule 2 isoform X1

      UniProtKB/TrEMBL
      A0A2K6QTF6
      Conserved Domains (3) summary
      cd09574
      Location:218 → 291
      SAM_STIM2; SAM domain of STIM2 subfamily proteins
      COG1196
      Location:324 → 533
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16533
      Location:434 → 539
      SOAR; STIM1 Orai1-activating region

    3. XM_030917592.1 → XP_030773452.1  stromal interaction molecule 2 isoform X3

      UniProtKB/TrEMBL
      A0A2K6QTF6
      Conserved Domains (3) summary
      cd09574
      Location:79 → 152
      SAM_STIM2; SAM domain of STIM2 subfamily proteins
      COG1196
      Location:185 → 394
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      pfam16533
      Location:295 → 400
      SOAR; STIM1 Orai1-activating region
    Nucleotide Protein
    Heading Accession and Version

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