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    LOC104824007 eukaryotic translation initiation factor 4B2-like [ Tarenaya hassleriana ]

    Gene ID: 104824007, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC104824007
    Gene description
    eukaryotic translation initiation factor 4B2-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tarenaya hassleriana
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Cleomaceae; New World clade; Tarenaya
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    Genomic context

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    See LOC104824007 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current ASM46358v1 (GCF_000463585.1) Unplaced Scaffold NW_010966881.1 (4583300..4586521, complement)

    NW_010966881.1Genomic Context describing neighboring genes Neighboring gene protein DETOXIFICATION 30-like Neighboring gene uncharacterized LOC104824008 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene uncharacterized LOC104824009 Neighboring gene proline-rich receptor-like protein kinase PERK13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010966881.1 Unplaced Scaffold Reference ASM46358v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables translation initiation factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    eukaryotic translation initiation factor 4B2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tarenaya hassleriana Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM46358v1

    Genomic

    1. NW_010966881.1 Reference ASM46358v1

      Range
      4583300..4586521 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010555851.2 → XP_010554153.1  eukaryotic translation initiation factor 4B2-like

      Conserved Domains (1) summary
      pfam06273
      Location:1 → 511
      eIF-4B; Plant specific eukaryotic initiation factor 4B
    Nucleotide Protein
    Heading Accession and Version

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