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    ATPSCKMT ATP synthase c subunit lysine N-methyltransferase [ Bison bison bison ]

    Gene ID: 104994078, updated on 12-Mar-2024

    Summary

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    Gene symbol
    ATPSCKMT
    Gene description
    ATP synthase c subunit lysine N-methyltransferase
    See related
    Ensembl:ENSBBBG00000008483
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bison bison bison (sub-species: bison)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bison
    Also known as
    FAM173B
    Orthologs
    human mouse all
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    Genomic context

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    See ATPSCKMT in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Bison_UMD1.0 (GCF_000754665.1) Unplaced Scaffold NW_011494822.1 (552185..568933)

    NW_011494822.1Genomic Context describing neighboring genes Neighboring gene carboxymethylenebutenolidase homolog Neighboring gene chaperonin containing TCP1 subunit 5 Neighboring gene taste 2 receptor member 1 Neighboring gene uncharacterized LOC104994081

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011494822.1 Unplaced Scaffold Reference Bison_UMD1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein-lysine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-lysine trimethylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of proton-transporting ATP synthase activity, rotational mechanism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of mitochondrial ATP synthesis coupled proton transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein FAM173B
    Names
    family with sequence similarity 173 member B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bison bison bison Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Bison_UMD1.0 Primary Assembly

    Genomic

    1. NW_011494822.1 Reference Bison_UMD1.0 Primary Assembly

      Range
      552185..568933
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010847530.1 → XP_010845832.1  protein FAM173B isoform X1

      See identical proteins and their annotated locations for XP_010845832.1

      UniProtKB/TrEMBL
      A0A6P3I2F0
      Related
      ENSBBBP00000015881.1, ENSBBBT00000032890.1
      Conserved Domains (1) summary
      cl17173
      Location:92 → 172
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. XM_010847532.1 → XP_010845834.1  protein FAM173B isoform X2

      See identical proteins and their annotated locations for XP_010845834.1

      UniProtKB/TrEMBL
      A0A6P3HTC5
      Conserved Domains (1) summary
      cl17173
      Location:9 → 89
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    3. XM_010847531.1 → XP_010845833.1  protein FAM173B isoform X2

      See identical proteins and their annotated locations for XP_010845833.1

      UniProtKB/TrEMBL
      A0A6P3HTC5
      Conserved Domains (1) summary
      cl17173
      Location:9 → 89
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    4. XM_010847533.1 → XP_010845835.1  protein FAM173B isoform X2

      See identical proteins and their annotated locations for XP_010845835.1

      UniProtKB/TrEMBL
      A0A6P3HTC5
      Conserved Domains (1) summary
      cl17173
      Location:9 → 89
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version

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