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    LINC02663 long intergenic non-protein coding RNA 2663 [ Homo sapiens (human) ]

    Gene ID: 105376402, updated on 10-Dec-2024

    Summary

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    Official Symbol
    LINC02663provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 2663provided by HGNC
    Primary source
    HGNC:HGNC:54149
    See related
    AllianceGenome:HGNC:54149
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    XLOC_008466
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LINC02663 in Genome Data Viewer
    Location:
    10p14
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (9443281..9878094, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (9447967..9889187, complement)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2676 Neighboring gene uncharacterized LOC101928272 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:9315328-9315828 Neighboring gene long intergenic non-protein coding RNA 709 Neighboring gene NANOG hESC enhancer GRCh37_chr10:9384821-9385337 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2990 Neighboring gene uncharacterized LOC124902542 Neighboring gene heat shock protein 90 alpha family class B member 7, pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr10:9919079-9919241 Neighboring gene uncharacterized LOC105376403 Neighboring gene long intergenic non-protein coding RNA 2670

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Tissue-specific circular RNA induction during human fetal development
    • Description: 35 human fetal samples from 6 tissues (3 - 7 replicates per tissue) collected between 10 and 20 weeks gestational time were sequenced using Illumina TruSeq Stranded Total RNA
    • BioProject: PRJNA270632
    • Publication: PMID 26076956
    • Analysis date: Mon Apr 2 22:54:59 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      9443281..9878094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_930643.2 RNA Sequence

    2. XR_930644.2 RNA Sequence

    3. XR_930645.3 RNA Sequence

    4. XR_930646.1 RNA Sequence

    5. XR_001747363.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      9447967..9889187 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007081534.1 RNA Sequence

    2. XR_007081535.1 RNA Sequence

    3. XR_007081536.1 RNA Sequence

    4. XR_007081537.1 RNA Sequence

    5. XR_007081538.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Other Literature Sources
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    Research Materials