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    LOC105627045 coiled-coil domain-containing protein 47 [ Atta cephalotes ]

    Gene ID: 105627045, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC105627045
    Gene description
    coiled-coil domain-containing protein 47
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Atta cephalotes
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
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    Genomic context

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    See LOC105627045 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012130072.1 (101055..103001, complement)

    NW_012130072.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 186 Neighboring gene PI-PLC X domain-containing protein 3 Neighboring gene kinesin-like protein 68D Neighboring gene uncharacterized protein CG7065-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012130072.1 Unplaced Scaffold Reference Attacep1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil domain-containing protein 47

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Attacep1.0

    Genomic

    1. NW_012130072.1 Reference Attacep1.0

      Range
      101055..103001 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012208324.1 → XP_012063714.1  coiled-coil domain-containing protein 47

      UniProtKB/TrEMBL
      A0A158P1Q6
      Conserved Domains (1) summary
      pfam07946
      Location:121 → 453
      DUF1682; Protein of unknown function (DUF1682)
    Nucleotide Protein
    Heading Accession and Version

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