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    TPM3 tropomyosin 3 [ Aotus nancymaae (Ma's night monkey) ]

    Gene ID: 105733614, updated on 15-Apr-2024

    Summary

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    Gene symbol
    TPM3
    Gene description
    tropomyosin 3
    See related
    Ensembl:ENSANAG00000026297
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aotus nancymaae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Aotidae; Aotus
    Orthologs
    human mouse all
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    Genomic context

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    See TPM3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_04 current 86718_ANA_hifiasm-v0.15.2.pri (GCF_030222135.1) Unplaced Scaffold NW_026988523.1 (33468911..33503115, complement)
    101 previous assembly Anan_2.0 (GCF_000952055.2) Unplaced Scaffold NW_018504986.1 (91803..128868)

    NW_026988523.1Genomic Context describing neighboring genes Neighboring gene nucleoporin 210 like Neighboring gene U6 spliceosomal RNA Neighboring gene large ribosomal subunit protein uL24-like Neighboring gene chromosome unknown C1orf43 homolog Neighboring gene cilia and flagella associated protein 141 Neighboring gene ubiquitin associated protein 2 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tropomyosin alpha-3 chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030222135.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

    Genomic

    1. NW_026988523.1 Reference 86718_ANA_hifiasm-v0.15.2.pri Primary Assembly

      Range
      33468911..33503115 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012476119.2 → XP_012331542.1  tropomyosin alpha-3 chain isoform X5

      See identical proteins and their annotated locations for XP_012331542.1

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 283
      Tropomyosin

    2. XM_012476118.2 → XP_012331541.1  tropomyosin alpha-3 chain isoform X3

      See identical proteins and their annotated locations for XP_012331541.1

      UniProtKB/TrEMBL
      A0A2K5D7U7
      Related
      ENSANAP00000017012.1
      Conserved Domains (1) summary
      pfam00261
      Location:49 → 283
      Tropomyosin

    3. XM_012476128.2 → XP_012331551.1  tropomyosin alpha-3 chain isoform X11

      See identical proteins and their annotated locations for XP_012331551.1

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    4. XM_012476126.2 → XP_012331549.1  tropomyosin alpha-3 chain isoform X10

      See identical proteins and their annotated locations for XP_012331549.1

      UniProtKB/TrEMBL
      A0A2K5D7X0
      Related
      ENSANAP00000017037.1
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    5. XM_012476131.2 → XP_012331554.1  tropomyosin alpha-3 chain isoform X14

      See identical proteins and their annotated locations for XP_012331554.1

      Conserved Domains (1) summary
      pfam00261
      Location:23 → 180
      Tropomyosin

    6. XM_012476117.2 → XP_012331540.1  tropomyosin alpha-3 chain isoform X2

      See identical proteins and their annotated locations for XP_012331540.1

      UniProtKB/TrEMBL
      A0A2K5DYJ0
      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    7. XM_012476123.2 → XP_012331546.1  tropomyosin alpha-3 chain isoform X7

      See identical proteins and their annotated locations for XP_012331546.1

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 282
      Tropomyosin

    8. XM_012476115.2 → XP_012331538.1  tropomyosin alpha-3 chain isoform X1

      See identical proteins and their annotated locations for XP_012331538.1

      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels

    9. XM_012476122.2 → XP_012331545.1  tropomyosin alpha-3 chain isoform X6

      See identical proteins and their annotated locations for XP_012331545.1

      Conserved Domains (1) summary
      pfam00261
      Location:49 → 282
      Tropomyosin

    10. XM_012476130.2 → XP_012331553.1  tropomyosin alpha-3 chain isoform X13

      See identical proteins and their annotated locations for XP_012331553.1

      UniProtKB/TrEMBL
      A0A2K5D7X3
      Related
      ENSANAP00000017042.1
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 245
      Tropomyosin

    11. XM_012476125.2 → XP_012331548.1  tropomyosin alpha-3 chain isoform X9

      See identical proteins and their annotated locations for XP_012331548.1

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    12. XM_012476129.2 → XP_012331552.1  tropomyosin alpha-3 chain isoform X12

      See identical proteins and their annotated locations for XP_012331552.1

      Conserved Domains (1) summary
      pfam00261
      Location:12 → 245
      Tropomyosin

    13. XM_012476124.2 → XP_012331547.1  tropomyosin alpha-3 chain isoform X8

      See identical proteins and their annotated locations for XP_012331547.1

      Related
      ENSANAP00000017039.1
      Conserved Domains (1) summary
      pfam00261
      Location:12 → 246
      Tropomyosin

    14. XM_012476120.2 → XP_012331543.1  tropomyosin alpha-3 chain isoform X4

      See identical proteins and their annotated locations for XP_012331543.1

      Conserved Domains (2) summary
      pfam00261
      Location:49 → 283
      Tropomyosin
      pfam16526
      Location:14 → 73
      CLZ; C-terminal leucine zipper domain of cyclic nucleotide-gated channels
    Nucleotide Protein
    Heading Accession and Version

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