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    LOC106309611 putative lactoylglutathione lyase [ Brassica oleracea (wild cabbage) ]

    Gene ID: 106309611, updated on 30-Oct-2024

    Summary

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    Gene symbol
    LOC106309611
    Gene description
    putative lactoylglutathione lyase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica oleracea
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC106309611 in Genome Data Viewer
    Location:
    chromosome: C8
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current BOL (GCF_000695525.1) C8 NC_027755.1 (20081799..20083907)

    Chromosome C8 - NC_027755.1Genomic Context describing neighboring genes Neighboring gene arogenate dehydratase/prephenate dehydratase 1, chloroplastic Neighboring gene glucan endo-1,3-beta-glucosidase 1 Neighboring gene aminomethyltransferase, mitochondrial-like Neighboring gene dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like Neighboring gene serine--tRNA ligase, chloroplastic/mitochondrial Neighboring gene GPI mannosyltransferase 2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_027755.1 Chromosome C8 Reference BOL Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lactoylglutathione lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative lactoylglutathione lyase
    Names
    Aldoketomutase
    Glx I
    Glyoxalase I
    Ketone-aldehyde mutase
    Methylglyoxalase
    S-D-lactoylglutathione methylglyoxal lyase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BOL Primary Assembly

    Genomic

    1. NC_027755.1 Reference BOL Primary Assembly

      Range
      20081799..20083907
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013746671.1 → XP_013602125.1  putative lactoylglutathione lyase

      UniProtKB/Swiss-Prot
      Q39365, Q39366
      UniProtKB/TrEMBL
      A0A0D3DP74, A0A3Q8PZP6
      Conserved Domains (3) summary
      PLN02300
      Location:1 → 283
      PLN02300; lactoylglutathione lyase
      TIGR00068
      Location:1 → 150
      glyox_I; lactoylglutathione lyase
      cl14632
      Location:148 → 277
      Glo_EDI_BRP_like; This domain superfamily is found in a variety of structurally related metalloproteins, including the type I extradiol dioxygenases, glyoxalase I and a group of antibiotic resistance proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q39366.1 GenPept UniProtKB/Swiss-Prot:Q39366

    Gene LinkOut

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