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    LOC106374467 protein SPIRAL1-like 5 [ Brassica napus (rape) ]

    Gene ID: 106374467, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC106374467
    Gene description
    protein SPIRAL1-like 5
    Locus tag
    HID58_001318
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica napus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC106374467 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Da-Ae (GCF_020379485.1) A1 NC_063434.1 (7386309..7387047, complement)
    101 previous assembly Bra_napus_v2.0 (GCF_000686985.2) A1 NC_027757.2 (9248067..9248798, complement)

    Chromosome A1 - NC_063434.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106441233 Neighboring gene uncharacterized LOC106374457 Neighboring gene probable polygalacturonase Neighboring gene uncharacterized LOC106441259

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cortical microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cortical microtubule, transverse to long axis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein SPIRAL1-like 5
    Names
    BnaA01g13110D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica napus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Da-Ae Primary Assembly

    Genomic

    1. NC_063434.1 Reference Da-Ae Primary Assembly

      Range
      7386309..7387047 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013814486.3 → XP_013669940.1  protein SPIRAL1-like 5

      UniProtKB/TrEMBL
      A0A078I4P8
    Nucleotide Protein
    Heading Accession and Version

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