U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LAMC2 laminin subunit gamma 2 [ Calidris pugnax (ruff) ]

    Gene ID: 106892074, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LAMC2
    Gene description
    laminin subunit gamma 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Calidris pugnax
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LAMC2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    100 current ASM143184v1 (GCF_001431845.1) Unplaced Scaffold NW_015090776.1 (652854..674268)

    NW_015090776.1Genomic Context describing neighboring genes Neighboring gene laminin subunit gamma 1 Neighboring gene laminin subunit gamma-1-like Neighboring gene nicotinamide nucleotide adenylyltransferase 2 Neighboring gene SMG7 nonsense mediated mRNA decay factor

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_015090776.1 Unplaced Scaffold Reference ASM143184v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables extracellular matrix structural constituent IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    laminin subunit gamma-2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Calidris pugnax Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM143184v1

    Genomic

    1. NW_015090776.1 Reference ASM143184v1

      Range
      652854..674268
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014948984.1 → XP_014804470.1  laminin subunit gamma-2

      Conserved Domains (6) summary
      smart00180
      Location:29 → 81
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      cd00055
      Location:459 → 509
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam00052
      Location:249 → 369
      Laminin_B; Laminin B (Domain IV)
      pfam00053
      Location:85 → 121
      Laminin_EGF; Laminin EGF domain
      pfam00261
      Location:931 → 1163
      Tropomyosin; Tropomyosin
      pfam11985
      Location:939 → 1073
      DUF3486; Protein of unknown function (DUF3486)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.