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    ERCC6 ERCC excision repair 6, chromatin remodeling factor [ Protobothrops mucrosquamatus ]

    Gene ID: 107293949, updated on 14-Mar-2024

    Summary

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    Gene symbol
    ERCC6
    Gene description
    ERCC excision repair 6, chromatin remodeling factor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Protobothrops mucrosquamatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Viperidae; Crotalinae; Protobothrops
    Orthologs
    human mouse all
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    Genomic context

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    See ERCC6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    101 current P.Mucros_1.0 (GCF_001527695.2) Unplaced Scaffold NW_015387919.1 (24106..57097)

    NW_015387919.1Genomic Context describing neighboring genes Neighboring gene dorsal root ganglia homeobox Neighboring gene chromosome unknown C10orf71 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015387919 Unplaced Scaffold Reference P.Mucros_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent chromatin remodeler activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transcription-coupled nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA excision repair protein ERCC-6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Protobothrops mucrosquamatus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.Mucros_1.0 Primary Assembly

    Genomic

    1. NW_015387919.1 Reference P.Mucros_1.0 Primary Assembly

      Range
      24106..57097
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029285501.1 → XP_029141334.1  DNA excision repair protein ERCC-6

      Conserved Domains (1) summary
      COG0553
      Location:486 → 1002
      HepA; Superfamily II DNA or RNA helicase, SNF2 family [Transcription, Replication, recombination and repair]
    Nucleotide Protein
    Heading Accession and Version

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