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    LOC107359974 protein draper [ Tetranychus urticae (two-spotted spider mite) ]

    Gene ID: 107359974, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC107359974
    Gene description
    protein draper
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tetranychus urticae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Acariformes; Trombidiformes; Prostigmata; Eleutherengona; Raphignathae; Tetranychoidea; Tetranychidae; Tetranychus
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    Genomic context

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    See LOC107359974 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current ASM23943v1 (GCF_000239435.1) Unplaced Scaffold NW_015449933.1 (2870371..2875175)

    NW_015449933.1Genomic Context describing neighboring genes Neighboring gene mitochondrial ornithine transporter 1 Neighboring gene uncharacterized LOC107360029 Neighboring gene prostatic acid phosphatase-like Neighboring gene palmitoyltransferase ZDHHC16B Neighboring gene motile sperm domain-containing protein 2-like Neighboring gene regucalcin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015449933 Unplaced Scaffold Reference ASM23943v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables scavenger receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    multiple epidermal growth factor-like domains protein 10; protein draper

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tetranychus urticae Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM23943v1 Primary Assembly

    Genomic

    1. NW_015449933.1 Reference ASM23943v1 Primary Assembly

      Range
      2870371..2875175
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015926578.2 → XP_015782064.1  protein draper isoform X1

      Conserved Domains (2) summary
      cd00055
      Location:143 → 180
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam07546
      Location:23 → 87
      EMI; EMI domain

    2. XM_015926579.2 → XP_015782065.1  multiple epidermal growth factor-like domains protein 10 isoform X2

      UniProtKB/TrEMBL
      T1K2P7
      Conserved Domains (2) summary
      cd00055
      Location:141 → 178
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam07546
      Location:23 → 87
      EMI; EMI domain
    Nucleotide Protein Strain
    Heading Accession and Version

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