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    osa trithorax group protein osa [ Drosophila rhopaloa ]

    Gene ID: 108042680, updated on 13-May-2024

    Summary

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    Gene symbol
    osa
    Gene description
    trithorax group protein osa
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila rhopaloa
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See osa in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    102 current ASM1815211v1 (GCF_018152115.1) Unplaced Scaffold NW_025335059.1 (2645851..2675541, complement)
    101 previous assembly Drho_2.0 (GCF_000236305.1) Unplaced Scaffold NW_016060070.1 (18946..48641)

    NW_025335059.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108042687 Neighboring gene RNA transcription, translation and transport factor protein Neighboring gene gamma-aminobutyric acid receptor-associated protein Neighboring gene chorion peroxidase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleosome binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of brahma complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of nBAF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    trithorax group protein osa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila rhopaloa Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815211v1

    Genomic

    1. NW_025335059.1 Reference ASM1815211v1

      Range
      2645851..2675541 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017121076.2 → XP_016976565.1  trithorax group protein osa isoform X3

      UniProtKB/TrEMBL
      A0A6P4EEJ5

    2. XM_017121074.2 → XP_016976563.1  trithorax group protein osa isoform X1

      UniProtKB/TrEMBL
      A0A6P4ENF6

    3. XM_017121075.2 → XP_016976564.1  trithorax group protein osa isoform X2

      UniProtKB/TrEMBL
      A0A6P4EJ13
    Nucleotide Protein
    Heading Accession and Version

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