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    LOC108250716 ral GTPase-activating protein subunit beta [ Kryptolebias marmoratus (mangrove rivulus) ]

    Gene ID: 108250716, updated on 10-Apr-2024

    Summary

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    Gene symbol
    LOC108250716
    Gene description
    ral GTPase-activating protein subunit beta
    See related
    EnsemblRapid:ENSKMAG00010022713
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Kryptolebias marmoratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
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    Genomic context

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    See LOC108250716 in Genome Data Viewer
    Location:
    chromosome: LG4
    Exon count:
    35
    Annotation release Status Assembly LG Location
    102 current ASM164957v2 (GCF_001649575.2) LG4 NC_051433.1 (71100..103726, complement)
    101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094919.1 (3834..36662, complement)

    Linkage Group LG4 - NC_051433.1Genomic Context describing neighboring genes Neighboring gene phospholipid transfer protein-like Neighboring gene ketohexokinase Neighboring gene potassium voltage-gated channel, KQT-like subfamily, member 2b Neighboring gene cathepsin A Neighboring gene small nuclear ribonucleoprotein polypeptides B and B1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in activation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of small GTPase mediated signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ral GTPase-activating protein subunit beta

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM164957v2 Primary Assembly

    Genomic

    1. NC_051433.1 Reference ASM164957v2 Primary Assembly

      Range
      71100..103726 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037975550.1 → XP_037831478.1  ral GTPase-activating protein subunit beta isoform X8

      UniProtKB/TrEMBL
      A0A3Q3AS47
      Related
      ENSKMAP00010048652.1, ENSKMAT00010051894.1

    2. XM_037975547.1 → XP_037831475.1  ral GTPase-activating protein subunit beta isoform X5

      UniProtKB/TrEMBL
      A0A3Q3AS47

    3. XM_037975545.1 → XP_037831473.1  ral GTPase-activating protein subunit beta isoform X3

      UniProtKB/TrEMBL
      A0A3Q3AS47

    4. XM_037975549.1 → XP_037831477.1  ral GTPase-activating protein subunit beta isoform X7

      UniProtKB/TrEMBL
      A0A3Q3AS47

    5. XM_037975548.1 → XP_037831476.1  ral GTPase-activating protein subunit beta isoform X6

      UniProtKB/TrEMBL
      A0A3Q3AS47

    6. XM_037975544.1 → XP_037831472.1  ral GTPase-activating protein subunit beta isoform X2

      UniProtKB/TrEMBL
      A0A3Q3AS47
      Related
      ENSKMAP00010048633.1, ENSKMAT00010051875.1

    7. XM_037975546.1 → XP_037831474.1  ral GTPase-activating protein subunit beta isoform X4

      UniProtKB/TrEMBL
      A0A3Q3AS47

    8. XM_025002692.2 → XP_024858460.1  ral GTPase-activating protein subunit beta isoform X1

      UniProtKB/TrEMBL
      A0A3Q3AS47

    9. XM_025002691.2 → XP_024858459.1  ral GTPase-activating protein subunit beta isoform X1

      UniProtKB/TrEMBL
      A0A3Q3AS47

    10. XM_037975551.1 → XP_037831479.1  ral GTPase-activating protein subunit beta isoform X9

      UniProtKB/TrEMBL
      A0A3Q3AS47

    RNA

    1. XR_005233136.1 RNA Sequence

    2. XR_005233137.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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