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    LOC108620679 otopetrin-2 [ Drosophila arizonae ]

    Gene ID: 108620679, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC108620679
    Gene description
    otopetrin-2
    See related
    EnsemblRapid:LOC108620679
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila arizonae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC108620679 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM165402v1 (GCF_001654025.1) Unplaced Scaffold NW_017130841.1 (2842..9346)

    NW_017130841.1Genomic Context describing neighboring genes Neighboring gene Adenosine deaminase acting on RNA Neighboring gene uncharacterized LOC108620674

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017130841.1 Unplaced Scaffold Reference ASM165402v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables proton channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    otopetrin-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila arizonae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM165402v1

    Genomic

    1. NW_017130841.1 Reference ASM165402v1

      Range
      2842..9346
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018017583.1 → XP_017873072.1  otopetrin-2 isoform X2

      Related
      XP_017873072.1, XM_018017583.1

    2. XM_018017584.1 → XP_017873073.1  otopetrin-2 isoform X3

      Related
      XP_017873073.1, XM_018017584.1

    3. XM_018017582.1 → XP_017873071.1  otopetrin-2 isoform X1

      Related
      XP_017873071.1, XM_018017582.1
    Nucleotide Protein
    Heading Accession and Version

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