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    NUB1 negative regulator of ubiquitin like proteins 1 [ Gavialis gangeticus (Gharial) ]

    Gene ID: 109291218, updated on 14-Mar-2024

    Summary

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    Gene symbol
    NUB1
    Gene description
    negative regulator of ubiquitin like proteins 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gavialis gangeticus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Longirostres; Gavialidae; Gavialinae; Gavialis
    Orthologs
    human mouse all
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    Genomic context

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    See NUB1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    100 current GavGan_comp1 (GCF_001723915.1) Unplaced Scaffold NW_017729004.1 (14263183..14310190)

    NW_017729004.1Genomic Context describing neighboring genes Neighboring gene xylulokinase Neighboring gene chromosome unknown C9orf152 homolog Neighboring gene WD repeat domain 86 Neighboring gene crystallin gamma N

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017729004.1 Unplaced Scaffold Reference GavGan_comp1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NEDD8 ultimate buster 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gavialis gangeticus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GavGan_comp1 Primary Assembly

    Genomic

    1. NW_017729004.1 Reference GavGan_comp1 Primary Assembly

      Range
      14263183..14310190
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019508115.1 → XP_019363660.1  NEDD8 ultimate buster 1 isoform X1

    2. XM_019508114.1 → XP_019363659.1  NEDD8 ultimate buster 1 isoform X1

    3. XM_019508112.1 → XP_019363657.1  NEDD8 ultimate buster 1 isoform X1

    4. XM_019508113.1 → XP_019363658.1  NEDD8 ultimate buster 1 isoform X1

    5. XM_019508116.1 → XP_019363661.1  NEDD8 ultimate buster 1 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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