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    LOC109411696 lipoma-preferred partner homolog [ Aedes albopictus (Asian tiger mosquito) ]

    Gene ID: 109411696, updated on 9-Feb-2024

    Summary

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    Gene symbol
    LOC109411696
    Gene description
    lipoma-preferred partner homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Aedes albopictus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Aedini; Aedes; Stegomyia
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    Genomic context

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    See LOC109411696 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_01 current AalbF5 (GCF_035046485.1) 2 NC_085137.1 (3954103..3956737, complement)
    102 previous assembly Aalbo_primary.1 (GCF_006496715.1) Unplaced Scaffold NW_021837378.1 (35846826..35849468)

    Chromosome 2 - NC_085137.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134288814 Neighboring gene uncharacterized LOC134287348 Neighboring gene uncharacterized protein K02A2.6-like Neighboring gene rRNA-processing protein FCF1 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell-cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in stress fiber IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lipoma-preferred partner homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_035046485.1-RS_2024_01

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AalbF5 Primary Assembly

    Genomic

    1. NC_085137.1 Reference AalbF5 Primary Assembly

      Range
      3954103..3956737 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_019685269.3 → XP_019540814.2  lipoma-preferred partner homolog

      UniProtKB/TrEMBL
      A0A182GEL0
      Conserved Domains (3) summary
      cd09351
      Location:395 → 448
      LIM1_LPP; The first LIM domain of lipoma preferred partner (LPP)
      cd09354
      Location:455 → 514
      LIM2_LPP; The second LIM domain of lipoma preferred partner (LPP)
      cd09437
      Location:515 → 582
      LIM3_LPP; The third LIM domain of lipoma preferred partner (LPP)
    Nucleotide Protein Strain
    Heading Accession and Version

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    Molecular Biology Databases