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    LOC109693911 putative uncharacterized protein FLJ38447 [ Castor canadensis (American beaver) ]

    Gene ID: 109693911, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC109693911
    Gene description
    putative uncharacterized protein FLJ38447
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Castor canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Castoridae; Castor
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    Genomic context

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    See LOC109693911 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    100 current C.can genome v1.0 (GCF_001984765.1) Unplaced Scaffold NW_017871425.1 (89925..90596, complement)

    NW_017871425.1Genomic Context describing neighboring genes Neighboring gene cytochrome b5 domain-containing protein 1 Neighboring gene uncharacterized LOC109693899 Neighboring gene chromodomain helicase DNA binding protein 3 Neighboring gene potassium voltage-gated channel subfamily A regulatory beta subunit 3 Neighboring gene trafficking protein particle complex subunit 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_017871425.1 Unplaced Scaffold Reference C.can genome v1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: putative uncharacterized protein FLJ38447

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Castor canadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference C.can genome v1.0

    Genomic

    1. NW_017871425.1 Reference C.can genome v1.0

      Range
      89925..90596 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020175538.1 → XP_020031127.1  LOW QUALITY PROTEIN: putative uncharacterized protein FLJ38447

      UniProtKB/TrEMBL
      A0A8B7VI21, A0A8C0VXK6
      Conserved Domains (2) summary
      pfam15451
      Location:117 → 188
      DUF4632; Domain of unknown function (DUF4632)
      cl17238
      Location:17 → 55
      RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    Nucleotide Protein
    Heading Accession and Version

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