U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    PTP4A2 protein tyrosine phosphatase 4A2 [ Odocoileus virginianus (white-tailed deer) ]

    Gene ID: 110130623, updated on 15-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PTP4A2
    Gene description
    protein tyrosine phosphatase 4A2
    See related
    EnsemblRapid:ENSOVIG00010014630
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Odocoileus virginianus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Odocoileinae; Odocoileus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PTP4A2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current Ovir.te_1.0 (GCF_002102435.1) Unplaced Scaffold NW_018342397.1 (403390..429417)

    NW_018342397.1Genomic Context describing neighboring genes Neighboring gene refilin-B pseudogene Neighboring gene 60S ribosomal protein L13a pseudogene Neighboring gene SPOC domain containing 1 Neighboring gene adhesion G protein-coupled receptor B2 Neighboring gene uncharacterized LOC110130622

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_018342397 Unplaced Scaffold Reference Ovir.te_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein tyrosine phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein tyrosine phosphatase type IVA 2
    Names
    protein tyrosine phosphatase type IVA, member 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Odocoileus virginianus texanus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Ovir.te_1.0 Primary Assembly

    Genomic

    1. NW_018342397.1 Reference Ovir.te_1.0 Primary Assembly

      Range
      403390..429417
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020882758.1 → XP_020738417.1  protein tyrosine phosphatase type IVA 2

      UniProtKB/TrEMBL
      A0A6J0WKP0
      Related
      ENSOVIP00010020741.1, ENSOVIT00010023424.1
      Conserved Domains (1) summary
      cd18536
      Location:1 → 155
      PTP-IVa2; protein tyrosine phosphatase type IVA 2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.