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    LOC111272518 zinc finger protein DPF3-like [ Varroa jacobsoni ]

    Gene ID: 111272518, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC111272518
    Gene description
    zinc finger protein DPF3-like
    See related
    EnsemblRapid:LOC111272518
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Varroa jacobsoni
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Mesostigmata; Gamasina; Dermanyssoidea; Varroidae; Varroa
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    Genomic context

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    See LOC111272518 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current vjacob_1.0 (GCF_002532875.1) Unplaced Scaffold NW_019214822.1 (2092..15143, complement)

    NW_019214822.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase B-raf-like Neighboring gene uncharacterized LOC111272519

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_019214822 Unplaced Scaffold Reference vjacob_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in nervous system development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nBAF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein DPF3-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Varroa jacobsoni Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference vjacob_1.0

    Genomic

    1. NW_019214822.1 Reference vjacob_1.0

      Range
      2092..15143 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022854015.1 → XP_022709750.1  zinc finger protein DPF3-like

      Related
      XP_022709750.1, XM_022854015.1
      Conserved Domains (4) summary
      COG5189
      Location:307 → 339
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:489 → 534
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15619
      Location:432 → 487
      PHD1_d4; PHD finger 1 found in d4 gene family proteins
      pfam14051
      Location:50 → 121
      Requiem_N; N-terminal domain of DPF2/REQ

    2. XM_022854016.1 → XP_022709751.1  zinc finger protein DPF3-like

      Related
      XP_022709751.1, XM_022854016.1
      Conserved Domains (4) summary
      COG5189
      Location:307 → 339
      SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
      cd15530
      Location:489 → 534
      PHD2_d4; PHD finger 2 found in d4 gene family proteins
      cd15619
      Location:432 → 487
      PHD1_d4; PHD finger 1 found in d4 gene family proteins
      pfam14051
      Location:50 → 121
      Requiem_N; N-terminal domain of DPF2/REQ
    Nucleotide Protein
    Heading Accession and Version

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