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    SP9 Sp9 transcription factor [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

    Gene ID: 111522189, updated on 15-Mar-2024

    Summary

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    Gene symbol
    SP9
    Gene description
    Sp9 transcription factor
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Piliocolobus tephrosceles
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
    Orthologs
    human mouse all
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    Genomic context

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    See SP9 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current ASM277652v3 (GCF_002776525.3) 11 NC_045444.1 (60293723..60297272)
    100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318105.1 (703992..706455, complement)

    Chromosome 11 - NC_045444.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111522177 Neighboring gene uncharacterized LOC111522190 Neighboring gene corepressor interacting with RBPJ, CIR1 Neighboring gene secernin 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Sp9

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM277652v3

    Genomic

    1. NC_045444.1 Reference ASM277652v3

      Range
      60293723..60297272
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023186018.3 → XP_023041786.1  transcription factor Sp9

      UniProtKB/TrEMBL
      A0A8C9IUM4
      Conserved Domains (3) summary
      sd00017
      Location:337 → 356
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:392 → 414
      zf-C2H2; Zinc finger, C2H2 type
      pfam13465
      Location:378 → 401
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein
    Heading Accession and Version

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