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    LOC112154886 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial [ Oryzias melastigma (Indian medaka) ]

    Gene ID: 112154886, updated on 10-Jul-2024

    Summary

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    Gene symbol
    LOC112154886
    Gene description
    NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
    See related
    EnsemblRapid:ENSOMEG00005030136
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryzias melastigma
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
    Also known as
    ndufs1
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    Genomic context

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    See LOC112154886 in Genome Data Viewer
    Location:
    chromosome: LG21
    Exon count:
    19
    Annotation release Status Assembly LG Location
    101 current ASM292280v2 (GCF_002922805.2) LG21 NC_050532.1 (19715795..19726835)
    100 previous assembly Om_v0.7.RACA (GCF_002922805.1) Unplaced Scaffold NW_020096091.1 (9191692..9202617, complement)

    Linkage Group LG21 - NC_050532.1Genomic Context describing neighboring genes Neighboring gene ADAM metallopeptidase domain 23b Neighboring gene chemerin chemokine-like receptor 2 Neighboring gene INO80 complex subunit Da Neighboring gene serine/threonine kinase 24a (STE20 homolog, yeast)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes. Lai KP, et al. BMC Genomics, 2015 Feb 27. PMID 25765076, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NADH dehydrogenase (ubiquinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron-sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ATP synthesis coupled electron transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial
    Names
    NADH:ubiquinone oxidoreductase core subunit S1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryzias melastigma Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM292280v2 Primary Assembly

    Genomic

    1. NC_050532.1 Reference ASM292280v2 Primary Assembly

      Range
      19715795..19726835
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024286119.2 → XP_024141887.1  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform X1

      Related
      ENSOMEP00005057175.1, ENSOMET00005072370.1
      Conserved Domains (1) summary
      cl26508
      Location:45 → 732
      NADH-G_4Fe-4S_3; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region

    2. XM_024286120.2 → XP_024141888.1  NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform X2

      Conserved Domains (1) summary
      cl26508
      Location:45 → 625
      NADH-G_4Fe-4S_3; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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