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    MTMR6 myotubularin related protein 6 [ Nothoprocta perdicaria ]

    Gene ID: 112956297, updated on 15-Mar-2024

    Summary

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    Gene symbol
    MTMR6
    Gene description
    myotubularin related protein 6
    See related
    Ensembl:ENSNPEG00000009965
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nothoprocta perdicaria
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Tinamiformes; Tinamidae; Nothoprocta
    Orthologs
    human mouse all
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    Genomic context

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    See MTMR6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current notPer1 (GCF_003342845.1) Unplaced Scaffold NW_020455888.1 (691618..717429, complement)

    NW_020455888.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112956341 Neighboring gene APC membrane recruitment protein 2 Neighboring gene nucleoporin 58 Neighboring gene shisa family member 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020455888 Unplaced Scaffold Reference notPer1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-3,5-bisphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in dephosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myotubularin-related protein 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nothoprocta perdicaria Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference notPer1

    Genomic

    1. NW_020455888.1 Reference notPer1

      Range
      691618..717429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_026049796.1 → XP_025905581.1  myotubularin-related protein 6 isoform X1

      UniProtKB/TrEMBL
      A0A8C6ZI24
      Conserved Domains (2) summary
      cd13343
      Location:11 → 104
      PH-GRAM_MTMR6; Myotubularian (MTM) related (MTMR) 6 protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:130 → 449
      Myotub-related; Myotubularin-like phosphatase domain

    2. XM_026049797.1 → XP_025905582.1  myotubularin-related protein 6 isoform X2

      UniProtKB/TrEMBL
      A0A8C6ZI24
      Related
      ENSNPEP00000013331.1, ENSNPET00000013661.1
      Conserved Domains (2) summary
      cd13343
      Location:1 → 101
      PH-GRAM_MTMR6; Myotubularian (MTM) related (MTMR) 6 protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
      pfam06602
      Location:127 → 446
      Myotub-related; Myotubularin-like phosphatase domain
    Nucleotide Protein
    Heading Accession and Version

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