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    ATU_RS13350 TRAP transporter large permease [ Agrobacterium fabrum str. C58 ]

    Gene ID: 1134781, updated on 27-Aug-2024

    Summary

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    Gene symbol
    ATU_RS13350
    Gene description
    TRAP transporter large permease
    Locus tag
    ATU_RS13350
    Gene type
    protein coding
    Organism
    Agrobacterium fabrum str. C58 (strain: C58, culture-collection: ATCC:33970, type-material: type strain of Agrobacterium fabrum)
    Lineage
    Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex
    Old locus tag
    AGR_C_4974; Atu2743
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    Genomic context

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    Location:
    chromosome: circular
    Sequence:
    Chromosome: circular; NC_003062.2 (2739894..2741171)

    Chromosome circular - NC_003062.2Genomic Context describing neighboring genes Neighboring gene fumarylacetoacetate hydrolase family protein Neighboring gene TRAP transporter small permease Neighboring gene TRAP transporter substrate-binding protein Neighboring gene acetate--CoA ligase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003062.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Tripartite ATP-independent periplasmic (TRAP) transporters in bacteria and archaea. Mulligan C, et al. FEMS Microbiol Rev, 2011 Jan. PMID 20584082
    2. TRAP transporters: a new family of periplasmic solute transport systems encoded by the dctPQM genes of Rhodobacter capsulatus and by homologs in diverse gram-negative bacteria. Forward JA, et al. J Bacteriol, 1997 Sep. PMID 9287004, Free PMC Article
    3. TRAP transporters: an ancient family of extracytoplasmic solute-receptor-dependent secondary active transporters. Rabus R, et al. Microbiology (Reading), 1999 Dec. PMID 10627041
    4. The genome of the natural genetic engineer Agrobacterium tumefaciens C58. Wood DW, et al. Science, 2001 Dec 14. PMID 11743193
    5. Genome sequence of the plant pathogen and biotechnology agent Agrobacterium tumefaciens C58. Goodner B, et al. Science, 2001 Dec 14. PMID 11743194

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    TRAP transporter large permease

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003062.2 Reference assembly

      Range
      2739894..2741171
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_003516526.1 MULTISPECIES: TRAP transporter large permease [Rhizobium/Agrobacterium group]

      See identical proteins and their annotated locations for WP_003516526.1

      UniProtKB/TrEMBL
      A0A1S7MKJ5, A0AAJ4T8D8, A9CHF1
    Nucleotide Protein
    Heading Accession and Version