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    KIAA1107 KIAA1107 ortholog [ Lagenorhynchus obliquidens (Pacific white-sided dolphin) ]

    Gene ID: 113624473, updated on 9-Nov-2023

    Summary

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    Gene symbol
    KIAA1107
    Gene description
    KIAA1107 ortholog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lagenorhynchus obliquidens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Lagenorhynchus
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    Genomic context

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    See KIAA1107 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current ASM367639v1 (GCF_003676395.1) Unplaced Scaffold NW_020837957.1 (27709347..27800938)

    NW_020837957.1Genomic Context describing neighboring genes Neighboring gene epoxide hydrolase 4 Neighboring gene lysophosphatidylcholine acyltransferase 2B-like Neighboring gene uncharacterized LOC113624474 Neighboring gene U6 spliceosomal RNA Neighboring gene chromosome unknown C1orf146 homolog

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020837957 Unplaced Scaffold Reference ASM367639v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in neuron projection terminus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synaptic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    AP2-interacting clathrin-endocytosis protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Lagenorhynchus obliquidens Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM367639v1 Primary Assembly

    Genomic

    1. NW_020837957.1 Reference ASM367639v1 Primary Assembly

      Range
      27709347..27800938
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027114324.1 → XP_026970125.1  AP2-interacting clathrin-endocytosis protein

      Conserved Domains (4) summary
      cd14821
      Location:423 → 470
      SPOP_C_like; BACK-like Domain C-terminal to BTB in speckle-type POZ protein (SPOP) and similar proteins
      pfam00651
      Location:224 → 317
      BTB; BTB/POZ domain
      pfam15363
      Location:1763 → 1807
      DUF4596; Domain of unknown function (DUF4596)
      cl02518
      Location:48 → 120
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version

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