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    LOC113672658 centromere protein W-like [ Pocillopora damicornis ]

    Gene ID: 113672658, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC113672658
    Gene description
    centromere protein W-like
    Locus tag
    pdam_00021292
    See related
    EnsemblRapid:LOC113672658
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pocillopora damicornis
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Pocilloporidae; Pocillopora
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    Genomic context

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    See LOC113672658 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current ASM370409v1 (GCF_003704095.1) Unplaced Scaffold NW_020843589.1 (27779..28982, complement)

    NW_020843589.1Genomic Context describing neighboring genes Neighboring gene tetraspanin-36-like Neighboring gene synergin gamma-like Neighboring gene uncharacterized LOC113672637 Neighboring gene mitochondrial-processing peptidase subunit alpha-like Neighboring gene TBC1 domain family member 13-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020843589 Unplaced Scaffold Reference ASM370409v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in kinetochore assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centromere protein W-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pocillopora damicornis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM370409v1 Primary Assembly

    Genomic

    1. NW_020843589.1 Reference ASM370409v1 Primary Assembly

      Range
      27779..28982 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027188976.1 → XP_027044777.1  centromere protein W-like

      UniProtKB/TrEMBL
      A0A3M6V6B1
      Related
      XP_027044777.1, XM_027188976.1
      Conserved Domains (1) summary
      pfam15510
      Location:1 → 76
      CENP-W; CENP-W protein
    Nucleotide Protein
    Heading Accession and Version

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