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    LOC113940245 zinc finger protein 638-like [ Corapipo altera (White-ruffed manakin) ]

    Gene ID: 113940245, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC113940245
    Gene description
    zinc finger protein 638-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corapipo altera
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Corapipo
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    Genomic context

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    See LOC113940245 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    100 current ASM394572v1 (GCF_003945725.1) Unplaced Scaffold NW_020885230.1 (3774..30795, complement)

    NW_020885230.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020885230 Unplaced Scaffold Reference ASM394572v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: zinc finger protein 638-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corapipo altera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM394572v1

    Genomic

    1. NW_020885230.1 Reference ASM394572v1

      Range
      3774..30795 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027631358.1 → XP_027487159.1  LOW QUALITY PROTEIN: zinc finger protein 638-like

    Nucleotide Protein
    Heading Accession and Version

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