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    TRIM54 tripartite motif containing 54 [ Vombatus ursinus (common wombat) ]

    Gene ID: 114034673, updated on 15-Mar-2024

    Summary

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    Gene symbol
    TRIM54
    Gene description
    tripartite motif containing 54
    See related
    Ensembl:ENSVURG00010020666
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vombatus ursinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Vombatidae; Vombatus
    Orthologs
    human mouse all
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    Genomic context

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    See TRIM54 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    100 current bare-nosed wombat genome assembly (GCF_900497805.2) Unplaced Scaffold NW_020948840.1 (19577650..19607496, complement)

    NW_020948840.1Genomic Context describing neighboring genes Neighboring gene mitochondrial inner membrane protein MPV17 Neighboring gene urocortin Neighboring gene DnaJ heat shock protein family (Hsp40) member C5 gamma Neighboring gene solute carrier family 30 member 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020948840 Unplaced Scaffold Reference bare-nosed wombat genome assembly Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tripartite motif-containing protein 54

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vombatus ursinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bare-nosed wombat genome assembly Primary Assembly

    Genomic

    1. NW_020948840.1 Reference bare-nosed wombat genome assembly Primary Assembly

      Range
      19577650..19607496 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027850404.1 → XP_027706205.1  tripartite motif-containing protein 54

      UniProtKB/TrEMBL
      A0A4X2LP01
      Related
      ENSVURP00010026969.1, ENSVURT00010030725.1
    Nucleotide Protein
    Heading Accession and Version

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