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    LOC114105412 chymotrypsin-like elastase family member 2A [ Marmota flaviventris (yellow-bellied marmot) ]

    Gene ID: 114105412, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC114105412
    Gene description
    chymotrypsin-like elastase family member 2A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Marmota flaviventris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Marmota
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    Genomic context

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    See LOC114105412 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current GSC_YBM_2.0 (GCF_003676075.2) Unplaced Scaffold NW_023144788.1 (1484476..1498551)
    100 previous assembly ASM367607v1 (GCF_003676075.1) Unplaced Scaffold NW_020963264.1 (1484531..1498635)

    NW_023144788.1Genomic Context describing neighboring genes Neighboring gene forkhead associated phosphopeptide binding domain 1 Neighboring gene uncharacterized LOC114105421 Neighboring gene uncharacterized LOC117794916 Neighboring gene EF-hand domain family member D2 Neighboring gene caspase 9 Neighboring gene DnaJ heat shock protein family (Hsp40) member C16 Neighboring gene agmatinase (putative)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chymotrypsin-like elastase family member 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Marmota flaviventris Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GSC_YBM_2.0 Primary Assembly

    Genomic

    1. NW_023144788.1 Reference GSC_YBM_2.0 Primary Assembly

      Range
      1484476..1498551
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034637115.1 → XP_034493006.1  chymotrypsin-like elastase family member 2A

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases