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    rps28 ribosomal protein S28 [ Parambassis ranga (Indian glassy fish) ]

    Gene ID: 114450506, updated on 15-Mar-2024

    Summary

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    Gene symbol
    rps28
    Gene description
    ribosomal protein S28
    See related
    Ensembl:ENSPRNG00000022708
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parambassis ranga
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Ambassidae; Parambassis
    Orthologs
    human zebrafish all
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    Genomic context

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    See rps28 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current fParRan2.1 (GCF_900634625.1) 17 NC_041037.1 (13811298..13813008)

    Chromosome 17 - NC_041037.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel subfamily V member 2-like Neighboring gene insulin-like 3 (Leydig cell) Neighboring gene angiopoietin-like 4 Neighboring gene dipeptidyl peptidase 9

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_041037.1 Chromosome 17 Reference fParRan2.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maturation of SSU-rRNA IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    40S ribosomal protein S28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parambassis ranga Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fParRan2.1

    Genomic

    1. NC_041037.1 Reference fParRan2.1

      Range
      13811298..13813008
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_028428661.1 → XP_028284462.1  40S ribosomal protein S28

      UniProtKB/TrEMBL
      A0A6P7KAF0
      Conserved Domains (1) summary
      cd04457
      Location:10 → 69
      S1_S28E; S28E, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. S28E protein is a component of the 30S ribosomal subunit. S28E is highly conserved among archaea and eukaryotes. S28E may control ...

    2. XM_028428660.1 → XP_028284461.1  40S ribosomal protein S28

      UniProtKB/TrEMBL
      A0A6P7KAF0
      Related
      ENSPRNP00000047181.1, ENSPRNT00000049884.1
      Conserved Domains (1) summary
      cd04457
      Location:10 → 69
      S1_S28E; S28E, S1-like RNA-binding domain. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins. S28E protein is a component of the 30S ribosomal subunit. S28E is highly conserved among archaea and eukaryotes. S28E may control ...
    Nucleotide Protein
    Heading Accession and Version

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