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    Ecym_8418 Hypothetical protein [ Eremothecium cymbalariae DBVPG#7215 ]

    Gene ID: 11470024, updated on 6-Dec-2024

    Summary

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    Gene symbol
    Ecym_8418
    Gene description
    Hypothetical protein
    Locus tag
    Ecym_8418
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Eremothecium cymbalariae DBVPG#7215 (strain: DBVPG#7215)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium
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    Genomic context

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    See Ecym_8418 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Sequence:
    Chromosome: 8; NC_016456.1 (874901..879937)

    Chromosome 8 - NC_016456.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein eL8 Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016456.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in the eremothecium clade of the Saccharomyces complex revealed by comparative genomics. Wendland J, et al. G3 (Bethesda), 2011 Dec. PMID 22384365, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ABC-type peptide transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in fungal-type vacuole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in fungal-type vacuole membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Hypothetical protein
    XP_003648504.1
    • similar to Ashbya gossypii ACL072C

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016456.1 Reference assembly

      Range
      874901..879937
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003648456.1 → XP_003648504.1  Hypothetical protein Ecym_8418 [Eremothecium cymbalariae DBVPG#7215]

      See identical proteins and their annotated locations for XP_003648504.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G8JXW3
      Conserved Domains (4) summary
      cd03250
      Location:711 → 930
      ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
      cd03369
      Location:1396 → 1638
      ABCC_NFT1; ATP-binding cassette domain 2 of NFT1, subfamily C
      TIGR01271
      Location:292 → 1660
      CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
      cl00549
      Location:1104 → 1352
      ABC_membrane; ABC transporter transmembrane region
    Nucleotide Protein
    Heading Accession and Version

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