U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC115194691 interferon-induced very large GTPase 1-like [ Salmo trutta (river trout) ]

    Gene ID: 115194691, updated on 21-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC115194691
    Gene description
    interferon-induced very large GTPase 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Salmo trutta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salmo
    Annotation information
    Annotation category: partial on reference assembly
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC115194691 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    100 current fSalTru1.1 (GCF_901001165.1) 1 NC_042957.1 (53568579..53570919, complement)

    Chromosome 1 - NC_042957.1Genomic Context describing neighboring genes Neighboring gene PRKCA-binding protein-like Neighboring gene galectin-1-like Neighboring gene interferon-induced very large GTPase 1-like Neighboring gene cdc42 effector protein 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_042957.1 Chromosome 1 Reference fSalTru1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Salmo trutta Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSalTru1.1 Primary Assembly

    Genomic

    1. NC_042957.1 Reference fSalTru1.1 Primary Assembly

      Range
      53568579..53570919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_029754624.1 → XP_029610484.1  LOW QUALITY PROTEIN: interferon-induced very large GTPase 1-like

      Conserved Domains (2) summary
      cl27170
      Location:329 → 482
      DUF460; Protein of unknown function (DUF460)
      cl38936
      Location:67 → 134
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases