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    TPHA0P00660 uncharacterized protein [ Tetrapisispora phaffii CBS 4417 ]

    Gene ID: 11530766, updated on 6-Dec-2024

    Summary

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    Gene symbol
    TPHA0P00660
    Gene description
    uncharacterized protein
    Locus tag
    TPHA_0P00660
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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    Genomic context

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    See TPHA0P00660 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    1
    Sequence:
    Chromosome: 16; NC_016535.1 (136114..137535)

    Chromosome 16 - NC_016535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene ribose phosphate diphosphokinase subunit PRS5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016535.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables clathrin adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in clathrin-dependent endocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of AP-2 adaptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_003688658.1
    • similar to Saccharomyces cerevisiae APM4 (YOL062C); ancestral locus Anc_3.165

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016535.1 Reference assembly

      Range
      136114..137535
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003688610.1 → XP_003688658.1  uncharacterized protein TPHA_0P00660 [Tetrapisispora phaffii CBS 4417]

      See identical proteins and their annotated locations for XP_003688658.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G8C246
      Conserved Domains (1) summary
      cd09251
      Location:191 → 472
      AP-2_Mu2_Cterm; C-terminal domain of medium Mu2 subunit in ubiquitously expressed clathrin-associated adaptor protein (AP) complex AP-2
    Nucleotide Protein
    Heading Accession and Version

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