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    TPHA0P00680 uncharacterized protein [ Tetrapisispora phaffii CBS 4417 ]

    Gene ID: 11530768, updated on 6-Dec-2024

    Summary

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    Gene symbol
    TPHA0P00680
    Gene description
    uncharacterized protein
    Locus tag
    TPHA_0P00680
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Tetrapisispora phaffii CBS 4417 (strain: type strain:CBS 4417)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisispora
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    Genomic context

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    See TPHA0P00680 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    1
    Sequence:
    Chromosome: 16; NC_016535.1 (139640..141823)

    Chromosome 16 - NC_016535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene 40S ribosomal protein eS24

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_016535.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents. Gordon JL, et al. Proc Natl Acad Sci U S A, 2011 Dec 13. PMID 22123960, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    XP_003688660.1
    • similar to Saccharomyces cerevisiae UBP13 (YBL067C) and UBP9 (YER098W); ancestral locus Anc_7.390

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_016535.1 Reference assembly

      Range
      139640..141823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003688612.1 → XP_003688660.1  uncharacterized protein TPHA_0P00680 [Tetrapisispora phaffii CBS 4417]

      See identical proteins and their annotated locations for XP_003688660.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      G8C248
      Conserved Domains (2) summary
      cl02553
      Location:381 → 651
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
      pfam00443
      Location:374 → 650
      UCH; Ubiquitin carboxyl-terminal hydrolase
    Nucleotide Protein
    Heading Accession and Version

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