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    itpr1b inositol 1,4,5-trisphosphate receptor, type 1b [ Sphaeramia orbicularis (orbiculate cardinalfish) ]

    Gene ID: 115420246, updated on 12-Sep-2024

    Summary

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    Gene symbol
    itpr1b
    Gene description
    inositol 1,4,5-trisphosphate receptor, type 1b
    See related
    Ensembl:ENSSORG00005013628
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sphaeramia orbicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Gobiaria; Kurtiformes; Apogonoidei; Apogonidae; Apogoninae; Sphaeramia
    Orthologs
    human zebrafish all
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    Genomic context

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    See itpr1b in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    64
    Annotation release Status Assembly Chr Location
    100 current fSphaOr1.1 (GCF_902148855.1) 5 NC_043961.1 (11427224..11650479, complement)

    Chromosome 5 - NC_043961.1Genomic Context describing neighboring genes Neighboring gene N-acylethanolamine acid amidase Neighboring gene basic helix-loop-helix family, member e40 Neighboring gene uncharacterized LOC115420138 Neighboring gene SET domain and mariner transposase fusion gene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_043961.1 Chromosome 5 Reference fSphaOr1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables inositol 1,4,5 trisphosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables inositol 1,4,5-trisphosphate-gated calcium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inositol 1,4,5-trisphosphate receptor type 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sphaeramia orbicularis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fSphaOr1.1

    Genomic

    1. NC_043961.1 Reference fSphaOr1.1

      Range
      11427224..11650479 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_030135516.1 → XP_029991376.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X5

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2372 → 2645
      Ion_trans; Ion transport protein
      pfam01365
      Location:477 → 673
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 436
      MIR; MIR domain
      pfam08454
      Location:1983 → 2088
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    2. XM_030135523.1 → XP_029991383.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X12

      UniProtKB/TrEMBL
      A0A673BZN2
      Related
      ENSSORP00005047220.1, ENSSORT00005048393.1
      Conserved Domains (5) summary
      pfam00520
      Location:2314 → 2587
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1938 → 2043
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    3. XM_030135522.1 → XP_029991382.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X11

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2327 → 2600
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1938 → 2043
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    4. XM_030135518.1 → XP_029991378.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X7

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2367 → 2640
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1978 → 2083
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    5. XM_030135514.1 → XP_029991374.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X4

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2373 → 2646
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1984 → 2089
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    6. XM_030135520.1 → XP_029991380.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X9

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2342 → 2615
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1953 → 2058
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    7. XM_030135517.1 → XP_029991377.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X6

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2369 → 2642
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1993 → 2098
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    8. XM_030135513.1 → XP_029991373.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X3

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2375 → 2648
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1993 → 2098
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    9. XM_030135511.1 → XP_029991371.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X1

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2382 → 2655
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1993 → 2098
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    10. XM_030135524.1 → XP_029991384.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X13

      UniProtKB/TrEMBL
      A0A673BZN2
      Related
      ENSSORP00005048252.1, ENSSORT00005049442.1
      Conserved Domains (5) summary
      pfam00520
      Location:2304 → 2570
      Ion_trans; Ion transport protein
      pfam01365
      Location:477 → 673
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 436
      MIR; MIR domain
      pfam08454
      Location:1928 → 2033
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    11. XM_030135521.1 → XP_029991381.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X10

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2344 → 2610
      Ion_trans; Ion transport protein
      pfam01365
      Location:477 → 673
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 436
      MIR; MIR domain
      pfam08454
      Location:1968 → 2073
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    12. XM_030135519.1 → XP_029991379.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X8

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2367 → 2633
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1978 → 2083
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor

    13. XM_030135512.1 → XP_029991372.1  inositol 1,4,5-trisphosphate receptor type 1-like isoform X2

      UniProtKB/TrEMBL
      A0A673BZN2
      Conserved Domains (5) summary
      pfam00520
      Location:2382 → 2648
      Ion_trans; Ion transport protein
      pfam01365
      Location:487 → 683
      RYDR_ITPR; RIH domain
      pfam02815
      Location:233 → 446
      MIR; MIR domain
      pfam08454
      Location:1993 → 2098
      RIH_assoc; RyR and IP3R Homology associated
      pfam08709
      Location:4 → 225
      Ins145_P3_rec; Inositol 1,4,5-trisphosphate/ryanodine receptor
    Nucleotide Protein
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