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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001331114.2 → NP_001318043.1 aldehyde dehydrogenase family 3 member A2 isoform 1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AL672172
- UniProtKB/TrEMBL
-
Q99PH4
- Conserved Domains (1) summary
-
- cd07132
Location:5 → 444
- ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins
-
NM_001331115.2 → NP_001318044.1 aldehyde dehydrogenase family 3 member A2 isoform 3
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR, lacks a portion of the 5' coding region, and uses a downstream translation start site compared to variant 1. The encoded isoform (3) has a shorter N-terminus than isoform 1.
- Source sequence(s)
-
AL672172
- UniProtKB/TrEMBL
-
Q99PH4
- Conserved Domains (1) summary
-
- cl11961
Location:1 → 374
- ALDH-SF; NAD(P)+-dependent aldehyde dehydrogenase superfamily
-
NM_001417306.1 → NP_001404235.1 aldehyde dehydrogenase family 3 member A2 isoform 4
Status: VALIDATED
- Source sequence(s)
-
AL672172
- UniProtKB/TrEMBL
- Q3U7B5, Q8C3C9
-
NM_007437.6 → NP_031463.2 aldehyde dehydrogenase family 3 member A2 isoform 2
See identical proteins and their annotated locations for NP_031463.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate internal exon resulting in a frameshift, and differs in the 3' UTR. The encoded isoform (2) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AL672172
- Consensus CDS
-
CCDS24809.1
- UniProtKB/Swiss-Prot
- P47740, Q99L64
- UniProtKB/TrEMBL
- Q3U7B5, Q8C3C9
- Related
- ENSMUSP00000073764.8, ENSMUST00000074127.14
- Conserved Domains (1) summary
-
- cd07132
Location:5 → 444
- ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins
RNA
-
NR_138545.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate 3' exon structure compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL646093, AL672172
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000077.7 Reference GRCm39 C57BL/6J
- Range
-
61114240..61158267 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006532031.5 → XP_006532094.1 aldehyde dehydrogenase family 3 member A2 isoform X2
- UniProtKB/TrEMBL
- Q3U7B5, Q8C3C9
- Conserved Domains (1) summary
-
- cd07132
Location:5 → 444
- ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins
-
XM_006532030.5 → XP_006532093.1 aldehyde dehydrogenase family 3 member A2 isoform X1
- UniProtKB/TrEMBL
- B1AV77, Q8BQ93
- Related
- ENSMUSP00000104355.3, ENSMUST00000108715.3
- Conserved Domains (1) summary
-
- cd07132
Location:5 → 444
- ALDH_F3AB; Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins
RNA
-
XR_388332.5 RNA Sequence
-
XR_388331.5 RNA Sequence