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    LOC116782975 hemoglobin subunit rho-like [ Chiroxiphia lanceolata (lance-tailed manakin) ]

    Gene ID: 116782975, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC116782975
    Gene description
    hemoglobin subunit rho-like
    See related
    EnsemblRapid:ENSCLNG00000006193
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chiroxiphia lanceolata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
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    Genomic context

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    See LOC116782975 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current bChiLan1.pri (GCF_009829145.1) 2 NC_045638.1 (244751..246574)

    Chromosome 2 - NC_045638.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 52B2-like Neighboring gene folate receptor gamma-like Neighboring gene hemoglobin subunit beta-like Neighboring gene hemoglobin subunit beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045638.1 Chromosome 2 Reference bChiLan1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables haptoglobin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables organic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen carrier activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in hydrogen peroxide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oxygen transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in blood microparticle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of haptoglobin-hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of hemoglobin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hemoglobin subunit rho-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bChiLan1.pri

    Genomic

    1. NC_045638.1 Reference bChiLan1.pri

      Range
      244751..246574
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032680160.1 → XP_032536051.1  hemoglobin subunit rho-like

      Related
      ENSCLNP00000008890.1, ENSCLNT00000009427.1
      Conserved Domains (1) summary
      cd08925
      Location:85 → 223
      Hb-beta-like; Hemoglobin beta, gamma, delta, epsilon, and related Hb subunits
    Nucleotide Protein
    Heading Accession and Version

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