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    ATP2A3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [ Chiroxiphia lanceolata (lance-tailed manakin) ]

    Gene ID: 116796622, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ATP2A3
    Gene description
    ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3
    See related
    EnsemblRapid:ENSCLNG00000012217
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chiroxiphia lanceolata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Chiroxiphia
    Orthologs
    human mouse all
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    Genomic context

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    See ATP2A3 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    100 current bChiLan1.pri (GCF_009829145.1) 20 NC_045656.1 (4116065..4168531)

    Chromosome 20 - NC_045656.1Genomic Context describing neighboring genes Neighboring gene neuferricin Neighboring gene zinc finger ZZ-type and EF-hand domain containing 1 Neighboring gene purinergic receptor P2X 1 Neighboring gene calcium/calmodulin dependent protein kinase kinase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_045656.1 Chromosome 20 Reference bChiLan1.pri

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type calcium transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sarcoplasmic/endoplasmic reticulum calcium ATPase 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chiroxiphia lanceolata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bChiLan1.pri

    Genomic

    1. NC_045656.1 Reference bChiLan1.pri

      Range
      4116065..4168531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032707362.1 → XP_032563253.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X1

      Conserved Domains (1) summary
      cd02083
      Location:5 → 989
      P-type_ATPase_SERCA; sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA), similar to mammalian ATP2A1-3/SERCA1-3

    2. XM_032707364.1 → XP_032563255.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X3

      Conserved Domains (1) summary
      cd02083
      Location:5 → 989
      P-type_ATPase_SERCA; sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA), similar to mammalian ATP2A1-3/SERCA1-3

    3. XM_032707363.1 → XP_032563254.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X2

      Related
      ENSCLNP00000020002.1, ENSCLNT00000021222.1
      Conserved Domains (1) summary
      cd02083
      Location:5 → 989
      P-type_ATPase_SERCA; sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA), similar to mammalian ATP2A1-3/SERCA1-3

    4. XM_032707365.1 → XP_032563256.1  sarcoplasmic/endoplasmic reticulum calcium ATPase 3 isoform X4

      Related
      ENSCLNP00000020004.1, ENSCLNT00000021224.1
      Conserved Domains (1) summary
      cd02083
      Location:5 → 989
      P-type_ATPase_SERCA; sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA), similar to mammalian ATP2A1-3/SERCA1-3
    Nucleotide Protein
    Heading Accession and Version

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