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    Axin1 axin 1 [ Rattus rattus (black rat) ]

    Gene ID: 116910556, updated on 18-Mar-2024

    Summary

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    Gene symbol
    Axin1
    Gene description
    axin 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus rattus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs
    human mouse all
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    Genomic context

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    See Axin1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Rrattus_CSIRO_v1 (GCF_011064425.1) 9 NC_046162.1 (3400823..3455972)

    Chromosome 9 - NC_046162.1Genomic Context describing neighboring genes Neighboring gene post-GPI attachment to proteins 6 Neighboring gene mitochondrial ribosomal protein L28 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene protein disulfide isomerase family A member 2 Neighboring gene Rho GDP dissociation inhibitor gamma

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046162.1 Chromosome 9 Reference Rrattus_CSIRO_v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in negative regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    axin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rattus rattus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rrattus_CSIRO_v1 Primary Assembly

    Genomic

    1. NC_046162.1 Reference Rrattus_CSIRO_v1 Primary Assembly

      Range
      3400823..3455972
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032914467.1 → XP_032770358.1  axin-1 isoform X3

      Conserved Domains (4) summary
      cd08707
      Location:94 → 214
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      cd11582
      Location:16 → 85
      Axin_TNKS_binding; Tankyrase binding N-terminal segment of axin
      pfam00778
      Location:788 → 865
      DIX; DIX domain
      pfam08833
      Location:469 → 500
      Axin_b-cat_bind; Axin beta-catenin binding domain

    2. XM_032914465.1 → XP_032770356.1  axin-1 isoform X1

      Conserved Domains (4) summary
      cd08707
      Location:136 → 256
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      cd11582
      Location:58 → 127
      Axin_TNKS_binding; Tankyrase binding N-terminal segment of axin
      pfam00778
      Location:830 → 907
      DIX; DIX domain
      pfam08833
      Location:511 → 542
      Axin_b-cat_bind; Axin beta-catenin binding domain

    3. XM_032914466.1 → XP_032770357.1  axin-1 isoform X2

      Conserved Domains (4) summary
      cd08707
      Location:136 → 256
      RGS_Axin; Regulator of G protein signaling (RGS) domain found in the Axin protein
      cd11582
      Location:58 → 127
      Axin_TNKS_binding; Tankyrase binding N-terminal segment of axin
      pfam00778
      Location:794 → 871
      DIX; DIX domain
      pfam08833
      Location:511 → 542
      Axin_b-cat_bind; Axin beta-catenin binding domain
    Nucleotide Protein
    Heading Accession and Version

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