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    LOC116923952 chymotrypsin-1 [ Daphnia magna ]

    Gene ID: 116923952, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC116923952
    Gene description
    chymotrypsin-1
    See related
    EnsemblRapid:LOC116923952
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Daphnia magna
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Branchiopoda; Diplostraca; Cladocera; Anomopoda; Daphniidae; Daphnia
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    Genomic context

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    See LOC116923952 in Genome Data Viewer
    Location:
    chromosome: LG5
    Exon count:
    8
    Annotation release Status Assembly LG Location
    101 current ASM2063170v1.1 (GCF_020631705.1) LG5 NC_059186.1 (7795324..7797710)
    100 previous assembly ASM399081v1 (GCF_003990815.1) LG5 NC_046178.1 (5315575..5317413)

    Linkage Group LG5 - NC_059186.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116923063 Neighboring gene carboxypeptidase B-like Neighboring gene carboxypeptidase B Neighboring gene uncharacterized LOC116922904 Neighboring gene uncharacterized LOC116922910 Neighboring gene Monocarboxylate transporter 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chymotrypsin-1
    Names
    Clip-domain serine protease

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Daphnia magna Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2063170v1.1 Primary Assembly

    Genomic

    1. NC_059186.1 Reference ASM2063170v1.1 Primary Assembly

      Range
      7795324..7797710
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045174603.1 → XP_045030538.1  chymotrypsin-1

      UniProtKB/TrEMBL
      A0A0P5A4E9, A0A0P5QYI9
      Related
      XP_045030538.1, XM_045174603.1
    Nucleotide Protein
    Heading Accession and Version

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