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    ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 [ Petromyzon marinus (sea lamprey) ]

    Gene ID: 116946641, updated on 1-Aug-2024

    Summary

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    Gene symbol
    ASAP2
    Gene description
    ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
    See related
    EnsemblRapid:ENSPMAG00000022758
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Petromyzon marinus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Cyclostomata; Hyperoartia; Petromyzontiformes; Petromyzontidae; Petromyzon
    Orthologs
    human mouse all
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    Genomic context

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    See ASAP2 in Genome Data Viewer
    Location:
    chromosome: 27
    Exon count:
    29
    Annotation release Status Assembly Chr Location
    100 current kPetMar1.pri (GCF_010993605.1) 27 NC_046095.1 (10923246..11032523)

    Chromosome 27 - NC_046095.1Genomic Context describing neighboring genes Neighboring gene death-inducer obliterator 1-like Neighboring gene elongation of very long chain fatty acids protein 5-like Neighboring gene uncharacterized LOC116946644 Neighboring gene transcription elongation factor A protein 2-like Neighboring gene regulator of G-protein signaling 20-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046095.1 Chromosome 27 Reference kPetMar1.pri Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Petromyzon marinus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference kPetMar1.pri Primary Assembly

    Genomic

    1. NC_046095.1 Reference kPetMar1.pri Primary Assembly

      Range
      10923246..11032523
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_032961756.1 → XP_032817647.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X3

      UniProtKB/TrEMBL
      A0AAJ7TGX2
      Conserved Domains (7) summary
      cd11821
      Location:879 → 931
      SH3_ASAP; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins
      PHA03247
      Location:596 → 875
      PHA03247; large tegument protein UL36; Provisional
      cd13251
      Location:203 → 309
      PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
      sd00045
      Location:491 → 524
      ANK; ANK repeat [structural motif]
      cd08834
      Location:325 → 443
      ArfGap_ASAP; ArfGAP domain of ASAP (Arf GAP, SH3, ANK repeat and PH domains) subfamily of ADP-ribosylation factor GTPase-activating proteins
      pfam12796
      Location:495 → 579
      Ank_2; Ankyrin repeats (3 copies)
      cl12013
      Location:31 → 150
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    2. XM_032961754.1 → XP_032817645.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1

      UniProtKB/TrEMBL
      A0AAJ7TGW7
      Conserved Domains (7) summary
      cd11821
      Location:977 → 1029
      SH3_ASAP; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins
      PHA03247
      Location:694 → 973
      PHA03247; large tegument protein UL36; Provisional
      cd13251
      Location:301 → 407
      PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
      sd00045
      Location:589 → 622
      ANK; ANK repeat [structural motif]
      cd08834
      Location:423 → 541
      ArfGap_ASAP; ArfGAP domain of ASAP (Arf GAP, SH3, ANK repeat and PH domains) subfamily of ADP-ribosylation factor GTPase-activating proteins
      pfam12796
      Location:593 → 677
      Ank_2; Ankyrin repeats (3 copies)
      cl12013
      Location:34 → 248
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    3. XM_032961755.1 → XP_032817646.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X2

      UniProtKB/TrEMBL
      A0AAJ7TGQ2
      Related
      ENSPMAP00000027538.1, ENSPMAT00000040883.1
      Conserved Domains (7) summary
      cd11821
      Location:974 → 1026
      SH3_ASAP; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing proteins
      PHA03247
      Location:691 → 970
      PHA03247; large tegument protein UL36; Provisional
      cd13251
      Location:298 → 404
      PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
      sd00045
      Location:586 → 619
      ANK; ANK repeat [structural motif]
      cd08834
      Location:420 → 538
      ArfGap_ASAP; ArfGAP domain of ASAP (Arf GAP, SH3, ANK repeat and PH domains) subfamily of ADP-ribosylation factor GTPase-activating proteins
      pfam12796
      Location:590 → 674
      Ank_2; Ankyrin repeats (3 copies)
      cl12013
      Location:34 → 248
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Nucleotide Protein
    Heading Accession and Version

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