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    Mat1a methionine adenosyltransferase 1A [ Mus musculus (house mouse) ]

    Gene ID: 11720, updated on 27-Nov-2024

    Summary

    Official Symbol
    Mat1aprovided by MGI
    Official Full Name
    methionine adenosyltransferase 1Aprovided by MGI
    Primary source
    MGI:MGI:88017
    See related
    Ensembl:ENSMUSG00000037798 AllianceGenome:MGI:88017
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Ams; MAT; SAMS; MATA1; SAMS1; AdoMet
    Summary
    This gene encodes a member of the AdoMet synthase family. Methionine adenosyltransferase is a product of this gene (the alpha form) and the beta form and catalyzes the formation of S-adenosylmethionine from methionine and ATP.[provided by RefSeq, Jan 2013]
    Expression
    Restricted expression toward liver adult (RPKM 598.5) See more
    Orthologs
    NEW
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    Genomic context

    See Mat1a in Genome Data Viewer
    Location:
    14 B; 14 22.36 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 14 NC_000080.7 (40826969..40846385)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 14 NC_000080.6 (41105012..41124428)

    Chromosome 14 - NC_000080.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5429 Neighboring gene peroxiredoxin like 2A Neighboring gene STARR-seq mESC enhancer starr_36477 Neighboring gene DPY30 domain containing 2 Neighboring gene DPY30 domain containing 1 Neighboring gene surfactant associated protein A1 Neighboring gene pleckstrin homology domain containing, family F (with FYVE domain) member 2 pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (3) 
    • Targeted (1)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ADP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables ATP binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables amino acid binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables magnesium ion binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables methionine adenosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables methionine adenosyltransferase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables methionine adenosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables methionine adenosyltransferase activity TAS
    Traceable Author Statement
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in S-adenosylmethionine biosynthetic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in S-adenosylmethionine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in S-adenosylmethionine biosynthetic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in S-adenosylmethionine biosynthetic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in methionine catabolic process ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in methionine catabolic process ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in one-carbon metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein homotetramerization IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in protein homotetramerization ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein-containing complex assembly ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of methionine adenosyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
     
    part_of methionine adenosyltransferase complex ISO
    Inferred from Sequence Orthology
    more info
     
    located_in nuclear matrix ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    S-adenosylmethionine synthase isoform type-1; S-adenosylmethionine synthase
    Names
    adoMet synthetase 1
    methionine adenosyltransferase I, alpha
    NP_598414.1
    XP_006518513.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_133653.3NP_598414.1  S-adenosylmethionine synthase isoform type-1

      See identical proteins and their annotated locations for NP_598414.1

      Status: REVIEWED

      Source sequence(s)
      AC124400, AC154597, AK153832, BB807316, BB871001
      Consensus CDS
      CCDS26959.1
      UniProtKB/Swiss-Prot
      Q91X83
      Related
      ENSMUSP00000153488.2, ENSMUST00000225720.2
      Conserved Domains (1) summary
      PTZ00104
      Location:17394
      PTZ00104; S-adenosylmethionine synthase; Provisional

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000080.7 Reference GRCm39 C57BL/6J

      Range
      40826969..40846385
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006518450.3XP_006518513.1  S-adenosylmethionine synthase isoform X1

      See identical proteins and their annotated locations for XP_006518513.1

      UniProtKB/Swiss-Prot
      Q91X83
      Conserved Domains (1) summary
      PTZ00104
      Location:17394
      PTZ00104; S-adenosylmethionine synthase; Provisional