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    LOC117476084 peroxisomal membrane protein 2-like [ Trematomus bernacchii (emerald rockcod) ]

    Gene ID: 117476084, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC117476084
    Gene description
    peroxisomal membrane protein 2-like
    See related
    EnsemblRapid:ENSTBNG00005002726
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Trematomus bernacchii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
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    Genomic context

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    See LOC117476084 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022988176.1 (262172..263784)

    NW_022988176.1Genomic Context describing neighboring genes Neighboring gene glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like Neighboring gene peroxisomal membrane protein 2-like Neighboring gene polyubiquitin-like Neighboring gene glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like Neighboring gene glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like Neighboring gene transfer RNA lysine (anticodon UUU)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022988176 Unplaced Scaffold Reference fTreBer1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peroxisomal membrane protein 2-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fTreBer1.1

    Genomic

    1. NW_022988176.1 Reference fTreBer1.1

      Range
      262172..263784
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_034122457.1 → XP_033978348.1  peroxisomal membrane protein 2-like

      Related
      ENSTBNP00005004767.1, ENSTBNT00005005008.1
      Conserved Domains (1) summary
      pfam04117
      Location:94 → 155
      Mpv17_PMP22; Mpv17 / PMP22 family
    Nucleotide Protein
    Heading Accession and Version

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