U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    VP_RS06690 ATP-binding protein [ Vibrio parahaemolyticus RIMD 2210633 ]

    Gene ID: 1188882, updated on 31-Jan-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    VP_RS06690
    Gene description
    ATP-binding protein
    Locus tag
    VP_RS06690
    Gene type
    protein coding
    Organism
    Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    VP1375
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 1
    Sequence:
    Chromosome: 1; NC_004603.1 (1458736..1460073)

    Chromosome 1 - NC_004603.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene GNAT family N-acetyltransferase Neighboring gene SLC13 family permease Neighboring gene response regulator Neighboring gene regulatory protein ScrG Neighboring gene HD-GYP domain-containing protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_004603.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
    2. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739
    3. Crystal structure of a novel non-Pfam protein AF1514 from Archeoglobus fulgidus DSM 4304 solved by S-SAD using a Cr X-ray source. Li Y, et al. Proteins, 2008 Jun. PMID 18361456

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    ATP-binding protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004603.1 Reference assembly

      Range
      1458736..1460073
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_005480639.1 MULTISPECIES: ATP-binding protein [Vibrio]

      See identical proteins and their annotated locations for WP_005480639.1

      UniProtKB/TrEMBL
      A0A7Y0SQV3, Q87PX5
      Conserved Domains (2) summary
      COG4191
      Location:122 → 438
      COG4191; Signal transduction histidine kinase regulating C4-dicarboxylate transport system [Signal transduction mechanisms]
      cd00038
      Location:7 → 101
      CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.