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    EFNB2 ephrin B2 [ Sturnira hondurensis ]

    Gene ID: 119002005, updated on 30-Mar-2024

    Summary

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    Gene symbol
    EFNB2
    Gene description
    ephrin B2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sturnira hondurensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Phyllostomidae; Stenodermatinae; Sturnira
    Orthologs
    human mouse all
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    Genomic context

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    See EFNB2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    100.20210611 current WHU_Shon_v2.1 (GCF_014824575.2) Unplaced Scaffold NW_023524411.1 (3889939..3939410)

    NW_023524411.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S18-like Neighboring gene arginine and glutamate rich 1 Neighboring gene ubiquitin-40S ribosomal protein S27a-like Neighboring gene U6atac minor spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_023524411 Unplaced Scaffold Reference WHU_Shon_v2.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ephrin receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in blood vessel morphogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ephrin receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ephrin-B2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sturnira hondurensis Updated Annotation Release 100.20210611

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference WHU_Shon_v2.1

    Genomic

    1. NW_023524411.1 Reference WHU_Shon_v2.1

      Range
      3889939..3939410
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037067668.1 → XP_036923563.1  ephrin-B2

      Conserved Domains (1) summary
      cd10426
      Location:29 → 165
      Ephrin-B_Ectodomain; Ectodomain of Ephrin B
    Nucleotide Protein
    Heading Accession and Version

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