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    fliF flagellar basal-body MS-ring/collar protein FliF [ Vibrio parahaemolyticus RIMD 2210633 ]

    Gene ID: 1192232, updated on 14-Apr-2023

    Summary

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    Gene symbol
    fliF
    Gene description
    flagellar basal-body MS-ring/collar protein FliF
    Locus tag
    VP_RS22505
    Gene type
    protein coding
    Organism
    Vibrio parahaemolyticus RIMD 2210633 (strain: RIMD 2210633, substrain: RIMD 2210633)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio
    Old locus tag
    VPA1536
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    Genomic context

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    Location:
    chromosome: 2
    Sequence:
    Chromosome: 2; NC_004605.1 (1637775..1639529, complement)

    Chromosome 2 - NC_004605.1Genomic Context describing neighboring genes Neighboring gene flagellar export protein FliJ Neighboring gene flagellar protein export ATPase FliI Neighboring gene flagellar assembly protein FliH Neighboring gene flagellar motor switch protein FliG Neighboring gene sigma-54 dependent transcriptional regulator Neighboring gene flagellar hook-basal body complex protein FliE Neighboring gene OmpA family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_004605.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A filamentous phage associated with recent pandemic Vibrio parahaemolyticus O3:K6 strains. Nasu H, et al. J Clin Microbiol, 2000 Jun. PMID 10834969, Free PMC Article
    2. Genome sequence of Vibrio parahaemolyticus: a pathogenic mechanism distinct from that of V cholerae. Makino K, et al. Lancet, 2003 Mar 1. PMID 12620739

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    flagellar basal-body MS-ring/collar protein FliF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004605.1 Reference assembly

      Range
      1637775..1639529 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_011106531.1 MULTISPECIES: flagellar basal-body MS-ring/collar protein FliF [Vibrio]

      See identical proteins and their annotated locations for WP_011106531.1

      UniProtKB/TrEMBL
      A0A0L8ECC3, Q87FY4
      Conserved Domains (1) summary
      PRK07193
      Location:24 → 576
      fliF; flagellar MS-ring protein; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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