U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC119374456 homeobox protein prospero [ Rhipicephalus sanguineus (brown dog tick) ]

    Gene ID: 119374456, updated on 27-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC119374456
    Gene description
    homeobox protein prospero
    See related
    VectorBase:RSAN_026328; EnsemblRapid:LOC119374456
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhipicephalus sanguineus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC119374456 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current BIME_Rsan_1.4 (GCF_013339695.2) 11 NC_051186.1 (37413831..37454651)
    100 previous assembly ASM1333969v1 (GCF_013339695.1) 11 NC_051186.1 (37413868..37454686)

    Chromosome 11 - NC_051186.1Genomic Context describing neighboring genes Neighboring gene sterile alpha motif domain containing protein 4 smaug Neighboring gene dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial-like Neighboring gene spectrin beta chain Neighboring gene adenosine 3'-phospho 5'-phosphosulfate transporter 1 Neighboring gene mitochondrial ribonuclease P catalytic subunit

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    homeobox protein prospero

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BIME_Rsan_1.4

    Genomic

    1. NC_051186.1 Reference BIME_Rsan_1.4

      Range
      37413831..37454651
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037644557.2 → XP_037500485.1  homeobox protein prospero

      UniProtKB/TrEMBL
      A0A9D4QCY5
      Related
      XP_037500485.1, XM_037644557.2
      Conserved Domains (1) summary
      pfam05044
      Location:683 → 831
      HPD; Homeo-prospero domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases