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    LOC119382494 putative oxidoreductase GLYR1 homolog [ Rhipicephalus sanguineus (brown dog tick) ]

    Gene ID: 119382494, updated on 27-Mar-2024

    Summary

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    Gene symbol
    LOC119382494
    Gene description
    putative oxidoreductase GLYR1 homolog
    See related
    VectorBase:RSAN_048928; EnsemblRapid:LOC119382494
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rhipicephalus sanguineus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Rhipicephalus
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    Genomic context

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    See LOC119382494 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    101 current BIME_Rsan_1.4 (GCF_013339695.2) 2 NC_051177.1 (19839879..19994333, complement)
    100 previous assembly ASM1333969v1 (GCF_013339695.1) 2 NC_051177.1 (19841199..19994346, complement)

    Chromosome 2 - NC_051177.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119382491 Neighboring gene AF4/FMR2 family member lilliputian Neighboring gene leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 Neighboring gene uncharacterized LOC125757115 Neighboring gene STAGA complex 65 subunit gamma-like Neighboring gene lysosome membrane protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: putative oxidoreductase GLYR1 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Rhipicephalus sanguineus Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BIME_Rsan_1.4

    Genomic

    1. NC_051177.1 Reference BIME_Rsan_1.4

      Range
      19839879..19994333 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_037650205.2 → XP_037506133.1  LOW QUALITY PROTEIN: putative oxidoreductase GLYR1 homolog

      Related
      XP_037506133.1, XM_037650205.2
      Conserved Domains (3) summary
      COG2084
      Location:279 → 558
      MmsB; 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase [Lipid transport and metabolism]
      NF033909
      Location:96 → 214
      opacity_OapA; opacity-associated protein OapA
      cl02554
      Location:5 → 90
      PWWP; The PWWP domain, named for a conserved Pro-Trp-Trp-Pro motif, is a small domain consisting of 100-150 amino acids. The PWWP domain is found in numerous proteins that are involved in cell division, growth and differentiation. Most PWWP-domain proteins ...
    Nucleotide Protein
    Heading Accession and Version

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